Package: APCalign 1.1.1

Daniel Falster

APCalign: Resolving Plant Taxon Names Using the Australian Plant Census

The process of resolving taxon names is necessary when working with biodiversity data. 'APCalign' uses the Australian Plant Census (APC) and the Australian Plant Name Index (APNI) to align and update plant taxon names to current, accepted standards. 'APCalign' also supplies information about the established status of plant taxa across different states/territories.

Authors:Daniel Falster [aut, cre, cph], Elizabeth Wenk [aut, ctb], Will Cornwell [aut, ctb], Fonti Kar [aut, ctb], Carl Boettiger [ctb]

APCalign_1.1.1.tar.gz
APCalign_1.1.1.zip(r-4.5)APCalign_1.1.1.zip(r-4.4)APCalign_1.1.1.zip(r-4.3)
APCalign_1.1.1.tgz(r-4.4-any)APCalign_1.1.1.tgz(r-4.3-any)
APCalign_1.1.1.tar.gz(r-4.5-noble)APCalign_1.1.1.tar.gz(r-4.4-noble)
APCalign_1.1.1.tgz(r-4.4-emscripten)APCalign_1.1.1.tgz(r-4.3-emscripten)
APCalign.pdf |APCalign.html
APCalign/json (API)
NEWS

# Install 'APCalign' in R:
install.packages('APCalign', repos = c('https://traitecoevo.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/traitecoevo/apcalign/issues

Datasets:

On CRAN:

6.71 score 4 stars 18 scripts 264 downloads 13 exports 40 dependencies

Last updated 21 days agofrom:6a97a40c6f. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 16 2024
R-4.5-winNOTEOct 16 2024
R-4.5-linuxNOTEOct 16 2024
R-4.4-winNOTEOct 16 2024
R-4.4-macNOTEOct 16 2024
R-4.3-winNOTEOct 16 2024
R-4.3-macNOTEOct 16 2024

Exports:align_taxacreate_species_state_origin_matrixcreate_taxonomic_update_lookupdefault_versionget_apc_genus_family_lookupload_taxonomic_resourcesnative_anywhere_in_australiastandardise_namesstandardise_taxon_rankstate_diversity_countsstrip_namesstrip_names_extraupdate_taxonomy

Dependencies:arrowaskpassassertthatbitbit64clicliprcpp11crayoncurldplyrfansigenericsgluehmshttrjsonlitelifecyclemagrittrmimeopensslpillarpkgconfigprettyunitsprogresspurrrR6readrrlangstringdiststringistringrsystibbletidyselecttzdbutf8vctrsvroomwithr

APCalign

Rendered fromAPCalign.Rmdusingknitr::rmarkdownon Oct 16 2024.

Last update: 2024-06-16
Started: 2023-08-01

Methods for updating taxon names in APCalign

Rendered fromupdating-taxon-names.Rmdusingknitr::rmarkdownon Oct 16 2024.

Last update: 2024-08-26
Started: 2023-09-08