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Case study 3: Canham function growth with tree data from Barro Colorado Island2 months ago
References
Case study 1: Constant growth with SUSTAIN Trout data2 months ago
Overview | Load dependencies | Priors | Simulate data | Visualise data | SUSTAIN trout data | Transform data | Visualise raw data | Fit model using | Inspect estimates | $R^2$ | Individual growth functions ($\beta$) | Population hyper-parameters | References
Here be dragons2 months ago
Load dependencies | The model | Simulating data | Implementing models and collecting posterior estimates | Step size data | Analysis | Second cluster analysis | Where to from here?
hmde for Mathematicians2 months ago
Getting started with | The Theory | The Maths | The Stats | Integration of time series | Demonstration: Canham Growth - Multiple Individuals
Case study 2: von Bertalanffy growth with lizard size data2 months ago
Load dependencies | Overview | Priors | Visualise model | Lizard size data | Implementation | References
APCalign3 months ago
Installation | Retrieve taxonomic resources | Align and update plant taxon names | Plant established status across states/territories | Closer look at name standardisation with 'APCalign' | Aligning names to APC and APNI | Configuring matching precision and aligned output | Updating to APC-accepted names | Taxonomic resources used for updating names | Name updates at different taxonomic levels | Taxonomic splits | Generating lists of synonyms
Methods for updating taxon names in APCalign3 months ago
Aligning taxon names with taxon concepts/names in APC and APNI | Updating taxonomy | Outputs of APCalign
litterfitter5 months ago
Getting started
hmde1 years ago
Installation | Overview | Notation | hmde supported growth functions | Workflow | References
austraits1 years ago
Install and load austraits | Retrieve AusTraits database | Descriptive summaries of traits and taxa | Quickly look up data | Extracting data | Extracting by dataset | Extracting by taxonomy | Extracting by trait | Extracting from other tables | Extracting from a single table | Join data from other tables | Visualising data by site | Visualising data distribution and variance | Reshaping the traits table | Pivot wider | Binding trait values
diy1 years ago
Load dependencies | Configure galah | Submit data request | Pre-download check | Upload your own KML | Launch infinitylist and explore! | Open downloaded data
infinitylists1 years ago
Which records are returned? | Use the app | Local installation | Adding new taxa | Adapt infinitylists for other countries | Why did I get disconnected from the server?
bmsma2 years ago
Goal of package | Installation | {bmsma} supported models | Linear model
Getting Started4 years ago
One sample analyses | Testing for significance | Multiple sample analyses
datastorr10 years ago
Scope | Background | How datastorr works | The package interface | Worked example | Access control | Semantic versioning of data | Beyond GitHub | How it actually works