Package: litterfitter 0.1.5
litterfitter: Fits a Collection of Curves to Single-Cohort Decomposition Data
Fit different model forms to single-cohort litter decomposition data (mass remaining through time) using likelihood-based estimation. Models span simple empirical to process-motivated forms with differing numbers of free parameters. Provides parameter estimates, uncertainty, and tools for model comparison/selection. Based on Cornwell & Weedon (2013) <doi:10.1111/2041-210X.12138>.
Authors:
litterfitter_0.1.5.tar.gz
litterfitter_0.1.5.zip(r-4.7)litterfitter_0.1.5.zip(r-4.6)litterfitter_0.1.5.zip(r-4.5)
litterfitter_0.1.5.tgz(r-4.6-any)litterfitter_0.1.5.tgz(r-4.5-any)
litterfitter_0.1.5.tar.gz(r-4.7-any)litterfitter_0.1.5.tar.gz(r-4.6-any)
litterfitter_0.1.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
litterfitter/json (API)
NEWS
| # Install 'litterfitter' in R: |
| install.packages('litterfitter', repos = c('https://traitecoevo.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/traitecoevo/litterfitter/issues
Pkgdown/docs site:https://traitecoevo.github.io
- pineneedles - Decomposition trajectory for pine needles
carboncarboncycledecompositionecology-modellingsoil
Last updated from:aa902b06cd. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 169 | ||
| source / vignettes | OK | 177 | ||
| linux-release-x86_64 | OK | 177 | ||
| macos-release-arm64 | OK | 112 | ||
| macos-oldrel-arm64 | OK | 106 | ||
| windows-devel | OK | 128 | ||
| windows-release | OK | 131 | ||
| windows-oldrel | OK | 124 | ||
| wasm-release | OK | 115 |
Exports:bootstrap_parametersfit_litterplot_multiple_fitssteady_statetime_to_prop_mass_remaining
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Create a bootstrap distribution of a particular coefficient from a model fit | bootstrap_parameters |
| Fit different models to single cohort decomposition data | fit_litter |
| litterfitter: methods for fitting curves to litter decomposition trajectories | litterfitter-package litterfitter |
| decomposition trajectory for pine needles | pineneedles |
| Plot multiple fits on one graph with model selection results displayed | plot_multiple_fits |
| Plot Decomposition Trajectory and Curve Fit | plot.litfit |
| Plot the bootstrap distribution for a parameter from a litfit object | plot.litfit_bootstrap |
| Predict method for litfit objects | predict.litfit |
| Estimate Steady State Biomass | steady_state |
| Get the predicted time until half mass loss for a litter decomposition trajectory | time_to_prop_mass_remaining |
